I am thankful to all my mentors for their guidance and team members for their support during research and development.
| Funded Research Projects |
3. DFG - SFB 1047
2. DFG - Transregio 34 / Z1
- Project: Insect timing: mechanisms, plasticity and interactions.
- Funded by; SFB, DFG
- Role: Scientific Software Engineer (2013 - Present)
- Domains: Neurobiology, Genetics, Embedded Programming.
- Description: Embedded system development (hardware & software) with the ability to synchronize the cyclical changes in the environment by using light-dark cycles consisting of different interacting clock neurons of Drosophila.
- Organization: Department of Neurobiology and Genetics, Biocenter, University of Wuerzburg Germany
2. DFG - Transregio 34 / Z1
- Project: Z1: Bioinformatic tools, OMICs databases, a Staphylococcus aureus WIKI and their integration.
- Funded by; SFB, DFG
- Role: Scientific Software Engineer (2010 - 2013)
- Domains: Bioinformatics, Data Mining, Database, Graphics, Mathematics, Metabolism, Bacterial Infections
- Description: This project is about to integrate metabolite data, enzyme data including kinetics, protein data including protein interactions, and offer analysis of genomes, regulatory motifs, gene expression and cellular networks in S. aureus. It is also about to Improve the access to all data will exploit WIKI-like techniques for annotation, WEB services and enhancement in large-content visualization algorithms.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
1. DFG - SPP 1316
- Project: Modeling metabolism in intracellular infections comparing Salmonella and Listeria - SPP 1316
- Funded by: Deutsche Forshungsgemeinschaft (DFG), Germany
- Role: Scientific Software Engineer (2009 - 2013)
- Technologies: C#, Java, Matlab, C++ etc.
- Domains: Bioinformatics, Data Mining, Database, Flux, MIDA, Bacterial Infections, Mathematics
- Description: This project is about to identify metabolic pathways that are important for the bacteria during infection and to determine the metabolic fluxes. The metabolic reactions of the host organisms and the genetic mechanisms of metabolic adaptation will be unraveled.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
| Academic & Industrial Interdisciplinary Software Projects |
- Project: SFB 1047
- Role: Proposed, Software Engineer, Lead Researcher
- Technologies: C#, Dot net micro framework, Arduino etc.
- Domains: Neurobiology and Genetics
- Description: An embedded software application capable of controlling and automating associated hardware to synchronize the cyclical changes in the environment by using light-dark cycles consisting of different interacting clock neurons of Drosophila.
- Organization: Department of Neurobiology and Genetics, Biocenter, University of Wuerzburg Germany.
- Project: Isotopo MIDA
- Role: Proposed, Software Engineer, Lead Researcher
- Technologies: C-Sharp (#),Postgres SQL.
- Domains: Bioinformatics, Mass Isotopmer Analysis
- Description: Software application to analyze isotopic (labeled) experimental data by implementing Mass Isotopomers Analysis to predict isotopic distributions. Furthermore it also provides the File based Data Management System for experimental data.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
23. SFB 1047 Web Pages
- Project: SFB1047 Website
- Role: Web Developemnt & Management (2013-Present)
- Technologies: HTML, Typo
- Domains: Web Development
- Description: This is a website of a research project i.e. SFB 1047, funded by Germany Research Foundation (DFG). It is about to develop and manage a website, which will provide the project related information.
- Organization: Department of Neurobiology and Genetics, Biocenter, University of Wuerzburg Germany.
22. TR-34 Web Pages
- Project: Transregio 34 Website
- Role: Web Developemnt & Management (2010-2013)
- Technologies: HTML, Typo
- Domains: Web Development
- Description: This is a website of a research project i.e. Transregio, funded by Germany Research Foundation (DFG). It is about to develop and manage a website, which will provide the project related information.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
- Project: SPP1316 Websites
- Role: Web Developemnt & Management (2010-2013)
- Technologies: HTML, Typo
- Domains: Web Development
- Description: This is a website of a research project i.e. SPP1316, funded by Germany Research Foundation (DFG). It is about to develop and manage a website, which will provide the project related information.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
- Project: Least Square Mass Isotopomer Analyser
- Role: Proposed, Software Engineer, Lead Researcher
- Technologies: C-Sharp (#)
- Domains: Bioinformatics, Mass Isotopmer Analysis
- Description: Software application using Least
Square Mass Isotopomers Analysis Method to analyze distributed amount of
isotopes in a compound by measuring intensities level of each isotopic
species at each Mass. Furthermore it also provides the File based Data
Management System for experimental data.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
19. ADAM
- Project: Advance Product Data Analysis & Management
- Roles: Proposed, team lead and software engineer
- Technologies: C#, Java, MS.Sql etc.
- Domains: PLCM, Database, Health Care, Bioinformatics
- Description: Project is about to implement a high quality integrated PDM solution, expecting a broad acceptance in European industry for better patient data analysis and life cycle management.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
18. Iso-Db
- Project: Isotopomer Database
- Roles: Proposed, team lead and software engineer
- Technologies: C#, My.Sql, Flex etc.
- Domains: Bioinformatics, Mass Isotopmer Analysis, Database
- Description: This software research project is about to design and implement a new database management system for biological experimental isotopomers data.
- Organization: Department of Bioinformatics, Biocenter, University of Wuerzburg Germany.
- Project: Optimal Data Classifier
- Role: Software Engineer, Lead Researcher
- Technologies: Java, WEKA etc
- Domains: Machine Learning, Artificial Intelligence, Bioinformatics
- Description: An intelligent software application capable performing efficient data classification, optimization and learning behavior implementation with the use of mathematical algorithms e.g. Genetic Algorithm, Back Propagated Neural Network etc.
- Organization: Department of Bioinformatics University of Wuerzburg Germany.
- Project: Intelligent Semantic Oriented Agent based Search
- Role: Proposed, team lead and software engineer
- Technologies: Java, ANTLR, Flex, XML, RDF, OWL, MySQL etc
- Domains: Data Mining, Natural Language Processing, Graphical User Interface, Semantic Web and Knowledge Management
- Description: An enhanced Product Data Management Application capable of intelligently handling user requests by providing intelligent and flexible graphical user interface and implement a natural language based search for finding records.
- Organization: Mechanical Enginering Informatics and Virtual Product Development, Institute for Engineering Design and Logistics Engineering, Vienna University of Technology, Austria. University of Wuerzburg Germany.
- Project: Zeeshan Ahmed Java-Preprocessed source code analyzer
- Role: Software Engineer, Lead Researcher
- Technologies: Java, ANTLR, MySQL etc
- Domains: Compiler Constructions, Product Line Architectures, Metrics, Programming Languages
- Description: An intelligent software application capable of intelligently analyzing product line architecture based Java projects (preprocessed source code) by lexing, parsing and visualizing results in 2D and 3D diagrams (Graphs, Charts, Maps etc.)
- Organization: Vienna University of Technology, Austria.
- Project: : Plotter Control and Management System
- Role: Software Engineer, Researcher
- Technologies: Java, MySQL etc.
- Domains: Distributed Applications, System Programming
- Description: Embedded and distributed real time software application towards the retrieval of deployed plotter and printer's information from user system with a database management system for user given print requests, system snatches, transfers and saves processed information.
- Organization: Vienna
University of Technology, Austria.
- Project: Zeeshan Ahmed C-Preprocessed Source Code Analyzer
- Role: Software Engineer, Researcher
- Technologies: Java, ANTLR, MySQL etc
- Domains: Compiler Constructions, Product Line Architectures, Metrics, Programming Languages
- Description: An intelligent software application capable of intelligently analyzing product line architecture based C++ projects (preprocessed source code) by lexing, parsing and visualizing results in 2D and 3D diagrams (Graphs, Charts, Maps etc.)
- Organization: Vienna University of Technology, Austria.
12. VDI Bolt Calculations
- Project: VDI Schraubenberechnung/ VDI Bolt Calculation (2006)
- Role: Software Engineer, Researcher
- Technologies: Java, etc.
- Domains: Desktop Applications, Mechanical Engieering
- Description: Software application
capable of calculating Lateral load (in Germany Querbelastung) in both
ways i.e. Material and Dimension, using Force, Number of Screws, M
values, Fitting (with/out), Pretention (with/out). Furthermore this
project is also capable of estimating Tension Load (in Germany
Langsbelastung) as well.
- Organization: Vienna
University of Technology, Austria.
- Project: M-System-NT
- Role: Software Engineer, Researcher
- Technologies: Java, ANTLR, MySQL etc
- Domains: Compiler Constructions, Product Line Architectures, Metrics, Programming Languages
- Description: An intelligent software application capable of intelligently analyzing C projects (preprocessed source code) by lexing, parsing and visualizing results in 2D and 3D diagrams (Graphs, Charts, Maps etc.)
- Organization: Fraunhofer Institute Experimentells Software Engineering (IESE), Germany.
10. 5D Visualizer
- Project: Five Dimensional Visualizer
- Role: Software Engineer, Researcher
- Technologies: Java etc
- Domains: 5D Programming, Statistical Data Presentation
- Description: Software application capable of taking five dimensional data set as input and produce 3D and 5D Visualizations by drawing graphs using rendering, texturing and transparency effects.
- Organization: Fraunhofer Institute Experimentells Software Engineering (IESE), Germany.
- Project: BTH Online Student Forum
- Role: Software Engineer, Researcher
- Technologies: Java, Java Script, MySql.
- Domains: Online/Web Application
- Description: An online forum designed and developed to improve the communication process between alumni, new, old and upcoming students.
- Organization: Blekinge Institute of Technology, University of Blekinge Sweden.
- Project: TAC Online Multi Agent System
- Role: Software Engineer, Researcher
- Technologies: Java, Java Script, MySql.
- Domains: Online/Web Application, Online Trading, Statistics
- Description: Agent development for Trading Agent Competition (TAC); an international forum for promotion of research into the trading agent problems.
- Organization: Blekinge Institute of Technology, University of Blekinge Sweden.
- Project: BTH HCI Chat
- Role: Software Engineer, Researcher
- Technologies: Java, Java Script, MySql.
- Domains: Online/Web Application
- Description:
Online forum designed and developed to improve the communication process between alumni, new, old and upcoming students.
- Organization: Blekinge Institute of Technology, University of Blekinge Sweden.
- Project: Artificially Intelligent 3D Cybog
- Role: Software Engineer, Researcher
- Technologies: CAICL
- Domains: AI Game Application
- Description:
3D war Game Agent based on artificial intelligence concepts called AI WAR.
- Organization: Blekinge Institute of Technology, University of Blekinge Sweden.
- Project: Autonomous Electric Smart House
- Role: Software Engineer, Researcher
- Technologies: C, C++, VB 6, Nokia Tool Kit, Hardware and more
- Domains: Automation and Robotics
- Description: An embedded home automation system controlling and automating house's electric appliances and providing security system.
- Organization: University of Central Punjab Pakistan.
- Project: Wizr-Air
- Role: Software Engineer
- Technologies: VC++, VB. Net, VC#, Oracle, Matrox, UML, Rational Rose etc.
- Domains: Media Technology, Satellite, Database
- Description: An intelligent software application capable of completely running a TV Channel's satellite, news, database, transmission, graphics, hardware and mixing departments (Wiz-Air Library Management System, Wiz-TX, Switcher, Wiz-Air Studio and Wiz-Air News, sub products of the main product Wiz-Air); ; Complete broadcasting solutions for TV Channels.
- Organization: Wiz-Links Pakistan & Dubai.
3. O.I.C.S
- Project: Oras Inventory Control System
- Role: Software Engineer
- Technologies: VC- Sharp, Oracle etc.
- Domain: Database, Enterprise Distributed Application
- Description: A database/inventory control system capable of completely managing data of ORAS Company Pvt. Ltd.
- Organization: NSE Technologies, Pakistan & Singapore.
2. I-Photo Grapher & Portal
- Project: I-Photo Grapher and Portal
- Role: Software Quality Engineer
- Technologies: VC++ etc.
- Domains: Media Technology, Graphics
- Description: Software application capable of providing a complete image management system for Cameras.
- Organization: NSE Technologies, Pakistan & Singapore.
1. Habib Rafique DSL Accounts system
- Role: Software Engineer
- Technologies: VC- Sharp, Oracle etc.
- Domains: Database, Enterprise Distributed Application
- Description: A database/inventory control system capable of completely managing data of Habib Rafique DSL Department.This is your new webpage. You can delete this and replace it with whatever you want.
- Organization: Habib Rafique Technologies, Pakistan.
| Some Major Academic Projects |
- Ini Parser (2006), programmed in C#, Fraunhofer Institute Experimentells Software Engineering (IESE), Germany.
- Artificial Life (2006) programmed in C#, Blekinge Institute of Technology, Sweden.
- NHL ICE Hockey Team (2005), programmed in Java, Blekinge Institute of Technology, Sweden.
- Knowledge Base (2005), developed using C#, Ontology and Java, Blekinge Institute of Technology, Sweden.
- Kalaha AI Game (2005), developed in Visual Basic Dot Net, Blekinge Institute of Technology, Sweden.
- System Controller Controlling Computer (2004), University of Central Punjab, Pakistan.
- Online Book Shop (2002), developed in Java, University of Central Punjab, Pakistan.
- 2D Data Structure Tutor (2001), developed in C++, University of Central Punjab, Pakistan.
- Air War (2001), 2D Game developed in C++, University of Central Punjab, Pakistan.